Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ctss2.2 ENSDARG00000013771

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Description

cathepsin S, ortholog 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-55]

Gene Synonyms

ctssb.2, ctssb2, wu:fj84d06, zgc:111950, zgc:112489

Location

Chromosome 16: 29,514,473-29,519,977 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 234 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034102.7	ctss2.2-201	1267	330aa	ENSDARP00000034094.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BF64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174895.2	ctss2.2-203	998	330aa	ENSDARP00000143447.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BF64	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149054.2	ctss2.2-202	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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