Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pfkpb ENSDARG00000012801

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Description

phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]

Gene Synonyms

si:dkeyp-12a9.4

Location

Chromosome 2: 48,119,494-48,171,441 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 5 transcripts (splice variants), 232 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123040.4	pfkpb-201	4870	782aa	ENSDARP00000104718.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000156258.4	pfkpb-205	2349	782aa	ENSDARP00000128326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDM7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000146553.2	pfkpb-204	1005	335aa	ENSDARP00000122866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQS5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000141152.2	pfkpb-203	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137733.2	pfkpb-202	391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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