Gene: col1a1a ENSDARG00000012405

Description

collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]

Gene Synonyms

alpha1(I), cb21, chi, chihuahua, col1a1, med, microwaved, sb:cb21, sb:cb384, wu:fa99c12, wu:fb02c06

Location

GRCz11:CM002887.2

About this gene

This gene has 2 transcripts (splice variants), 181 orthologues, 52 paralogues and is associated with 89 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009393.8	col1a1a-201	5797	1447aa	ENSDARP00000003177.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140586.2	col1a1a-202	697	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary