Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: gtf2a1 ENSDARG00000011000

.

Description

general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]

Gene Synonyms

fc15h02, fj36b10, wu:fc15h02, wu:fj36b10, zgc:55847

Location

Chromosome 20: 16,437,741-16,453,603 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 2 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006443.7	gtf2a1-201	2736	369aa	ENSDARP00000015974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152813.2	gtf2a1-202	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.