Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nectin3b ENSDARG00000006604

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Description

nectin cell adhesion molecule 3b [Source:NCBI gene;Acc:541491]

Gene Synonyms

fj99c02, pvrl3b, pvrl3l, wu:fj99c02, zgc:113035

Location

Chromosome 21: 21,448,996-21,515,466 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 214 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147593.3	nectin3b-203	2383	574aa	ENSDARP00000121706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000031205.9	nectin3b-201	2249	574aa	ENSDARP00000028921.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141487.3	nectin3b-202	788	200aa	ENSDARP00000118438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBA4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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