Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lsm14aa ENSDARG00000006600

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Description

LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]

Gene Synonyms

fam61a, lsm14a, wu:fj52e11, zgc:63681, zgc:66203, zgc:77302

Location

Chromosome 25: 35,889,102-35,909,626 forward strand.

GRCz11:CM002909.2

About this gene

This gene has 4 transcripts (splice variants), 250 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023453.9	lsm14aa-201	2074	443aa	ENSDARP00000009428.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P111	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125821.3	lsm14aa-202	2105	85aa	ENSDARP00000104913.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P338	-
ENSDART00000135441.3	lsm14aa-203	892	263aa	ENSDARP00000118954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8I5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147093.2	lsm14aa-204	804	268aa	ENSDARP00000114341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIS2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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