Gene: cdh17 ENSDARG00000005112

Description

cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]

Gene Synonyms

cb903, fb65d02, wu:fb65d02

Location

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues, 49 paralogues and is associated with 9 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042895.6	cdh17-201	3326	868aa	ENSDARP00000042894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188870.1	cdh17-203	3168	868aa	ENSDARP00000154473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD80	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123187.3	cdh17-202	634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary