Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: usp49 ENSDARG00000000229

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Description

ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]

Gene Synonyms

si:rp71-11b17.7

Location

Chromosome 22: 567,733-584,610 forward strand.

GRCz11:CM002906.2

About this gene

This gene has 2 transcripts (splice variants), 205 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037069.5	usp49-201	2286	649aa	ENSDARP00000036071.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171036.2	usp49-202	5353	649aa	ENSDARP00000133726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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