Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDLIM5 ENSCPOG00000014742

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Description

PDZ and LIM domain 5 [Source:NCBI gene;Acc:100732952]

Location

Scaffold DS562877.1: 31,223,689-31,438,781 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 285 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCPOT00000040672.1	PDLIM5-202	1845	614aa	ENSCPOP00000028823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XTM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCPOT00000047878.1	PDLIM5-201	5233	596aa	ENSCPOP00000027728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XQC4	-
ENSCPOT00000038938.1	PDLIM5-205	2162	337aa	ENSCPOP00000031981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y2C7	-
ENSCPOT00000045010.1	PDLIM5-206	1793	214aa	ENSCPOP00000031572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y1Z0	-
ENSCPOT00000035410.1	PDLIM5-203	1725	574aa	ENSCPOP00000025393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XJA1	-
ENSCPOT00000014887.3	PDLIM5-204	1596	531aa	ENSCPOP00000013282.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0VRR0	-
ENSCPOT00000044075.1	PDLIM5-207	720	239aa	ENSCPOP00000023693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XE96	-
ENSCPOT00000037004.1	PDLIM5-208	705	234aa	ENSCPOP00000029232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XUM5	-
ENSCPOT00000032768.1	PDLIM5-209	678	225aa	ENSCPOP00000024355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XFW6	-

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Summary

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