Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: COL13A1 ENSCJAG00000016435

.

Description

collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]

Location

Primary_assembly 12: 56,575,821-56,733,148 reverse strand.

mCalJac1.pat.X:CM021926.1

About this gene

This gene has 10 transcripts (splice variants), 135 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000100600.2	COL13A1-201	2187	728aa	ENSCJAP00000078772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WM55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000032045.3	COL13A1-202	2154	717aa	ENSCJAP00000030325.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XIY2	-
ENSCJAT00000031967.4	COL13A1-203	2088	695aa	ENSCJAP00000030251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7B9Q0	-
ENSCJAT00000075113.2	COL13A1-204	2061	686aa	ENSCJAP00000060039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PBK2	-
ENSCJAT00000129706.1	COL13A1-205	2055	684aa	ENSCJAP00000087660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WM38	-
ENSCJAT00000082171.2	COL13A1-206	2007	668aa	ENSCJAP00000058498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8MES2	-
ENSCJAT00000143363.1	COL13A1-207	1977	658aa	ENSCJAP00000080759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3ZYW9	-
ENSCJAT00000099124.2	COL13A1-208	1938	645aa	ENSCJAP00000072055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4W2U8	-
ENSCJAT00000019220.5	COL13A1-209	1929	642aa	ENSCJAP00000018189.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7HC18	-
ENSCJAT00000076152.2	COL13A1-210	1833	610aa	ENSCJAP00000060653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8MJH4	-

.

Summary

.

.