Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSCAFG00845025353

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Description

calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]

Location

Primary_assembly 18: 52,941,097-53,053,224 reverse strand.

ROS_Cfam_1.0:CM025117.1

About this gene

This gene has 4 transcripts (splice variants), 224 orthologues, 20 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845045068.1	CAPN1-203	3132	715aa	ENSCAFP00845035330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0T891 A0A8I3S9F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845044932.1	CAPN1-202	3120	711aa	ENSCAFP00845035211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3S5B6	-
ENSCAFT00845045250.1	CAPN1-204	3027	680aa	ENSCAFP00845035482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PQP3	-
ENSCAFT00845044739.1	CAPN1-201	2380	714aa	ENSCAFP00845035055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0N4B5 A0A8I3S590	-

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Summary

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