Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSCAFG00845021967

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Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:403170]

Gene Synonyms

HMG1

Location

Primary_assembly 25: 9,663,749-9,670,011 forward strand.

ROS_Cfam_1.0:CM025124.1

About this gene

This gene has 3 transcripts (splice variants), 226 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845038767.1	HMGB1-201	1964	215aa	ENSCAFP00845030356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YKA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845038837.1	HMGB1-202	995	196aa	ENSCAFP00845030415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3P9Z9	-
ENSCAFT00845038808.1	HMGB1-203	881	159aa	ENSCAFP00845030393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PIN2 A0A8I3PE06	-

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Summary

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