Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL13A1 ENSCAFG00845003810

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Description

collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]

Location

Primary_assembly 4: 21,113,238-21,262,795 forward strand.

ROS_Cfam_1.0:CM025103.1

About this gene

This gene has 6 transcripts (splice variants), 143 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00845006942.1	COL13A1-201	3412	718aa	ENSCAFP00845005532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0QCA6 A0A8I3MJI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00845006956.1	COL13A1-202	3346	696aa	ENSCAFP00845005545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3MS31	-
ENSCAFT00845006973.1	COL13A1-203	3319	687aa	ENSCAFP00845005561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3MSW5	-
ENSCAFT00845006988.1	COL13A1-204	3265	669aa	ENSCAFP00845005575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0QCM1 A0A8I3MRF3	-
ENSCAFT00845006998.1	COL13A1-205	3196	646aa	ENSCAFP00845005582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0Q0T3 A0A8I3MS57	-
ENSCAFT00845007011.1	COL13A1-206	3091	611aa	ENSCAFP00845005594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0ND27 A0A8I3MS68	-

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Summary

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