Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: HMGB1 ENSCAFG00040016920

Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:403170]

Gene Synonyms

HMG1

Location

UMICH_Zoey_3.1:CM016593.1

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00040031271.1	HMGB1-202	902	240aa	ENSCAFP00040027186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0SX46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00040031360.1	HMGB1-203	2340	215aa	ENSCAFP00040027271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YKA4	-
ENSCAFT00040031317.1	HMGB1-201	656	159aa	ENSCAFP00040027230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PIN2 A0A8I3PE06	-

Summary