Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
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ID History
- Gene history

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Gene: SMG1 ENSCAFG00000018156

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Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:VGNC Symbol;Acc:VGNC:46554]

Location

Primary_assembly 6: 27,565,086-27,683,229 forward strand.

Dog10K_Boxer_Tasha:CM000006.4

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000028861.5	SMG1-203	15591	3659aa	ENSCAFP00000026839.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0NRE9 A0A8I3N269	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000096102.1	SMG1-201	15712	3634aa	ENSCAFP00000072587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0P4B3 A0A8I3MXW5	-
ENSCAFT00000049918.4	SMG1-202	11666	3654aa	ENSCAFP00000036405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NNL1	-
ENSCAFT00000028868.5	SMG1-205	2277	203aa	ENSCAFP00000026846.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PV87 A0A8P0SMG6	-
ENSCAFT00000082770.2	SMG1-204	366	88aa	ENSCAFP00000049445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PV97 A0A8P0T286	-

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Summary

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