Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: COL13A1 ENSCAFG00000013983

Description

collagen type XIII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:39459]

Location

Dog10K_Boxer_Tasha:CM000004.4

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000106906.1	COL13A1-201	3323	790aa	ENSCAFP00000073954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0PPW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000079626.2	COL13A1-205	3245	764aa	ENSCAFP00000058911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0P801	-
ENSCAFT00000093508.2	COL13A1-202	3245	764aa	ENSCAFP00000062400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0Q0V6 A0A8P0TE30	-
ENSCAFT00000077443.2	COL13A1-203	3218	755aa	ENSCAFP00000058917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0P803	-
ENSCAFT00000072096.2	COL13A1-204	3146	731aa	ENSCAFP00000043321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NTR7	-
ENSCAFT00000022194.5	COL13A1-206	3107	718aa	ENSCAFP00000020609.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0QCA6 A0A8I3MJI6	-
ENSCAFT00000082053.2	COL13A1-207	2960	669aa	ENSCAFP00000055132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0QCM1 A0A8I3MRF3	-

Summary