Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSCAFG00000013830

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Description

calpain 1 [Source:VGNC Symbol;Acc:VGNC:38698]

Location

Primary_assembly 18: 50,507,543-50,619,981 reverse strand.

Dog10K_Boxer_Tasha:CM000018.4

About this gene

This gene has 5 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000105437.1	CAPN1-204	3132	715aa	ENSCAFP00000073448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0T891 A0A8I3S9F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000094453.1	CAPN1-203	3218	676aa	ENSCAFP00000074776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0Z2K9 A0A8P0PQV4	-
ENSCAFT00000105039.1	CAPN1-202	3120	711aa	ENSCAFP00000070280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3S5B6	-
ENSCAFT00000094536.1	CAPN1-205	3027	680aa	ENSCAFP00000068111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PQP3	-
ENSCAFT00000021965.5	CAPN1-201	2275	679aa	ENSCAFP00000020396.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NFJ0	-

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Summary

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