Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSCAFG00000006597

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Description

high mobility group box 1 [Source:VGNC Symbol;Acc:VGNC:59082]

Location

Primary_assembly 25: 9,597,027-9,603,281 forward strand.

Dog10K_Boxer_Tasha:CM000025.4

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000010639.5	HMGB1-201	1963	215aa	ENSCAFP00000009862.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YKA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000046727.4	HMGB1-202	995	196aa	ENSCAFP00000041181.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3P9Z9	-
ENSCAFT00000093577.2	HMGB1-203	881	159aa	ENSCAFP00000048788.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PIN2 A0A8I3PE06	-

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Summary

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