Transcript: ENSBTAT00000066698.2 PSTPIP1-205

Description

proline-serine-threonine phosphatase interacting protein 1 [Source:VGNC Symbol;Acc:VGNC:33486]

Location

Primary_assembly 21: 32,138,565-32,160,462 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 21 domains and features and is associated with 3187 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000021144.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000028179.7	PSTPIP1-201	1935	457aa	ENSBTAP00000028179.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000111288.1	PSTPIP1-203	1689	407aa	ENSBTAP00000075722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000066698.2	PSTPIP1-205	1615	417aa	ENSBTAP00000067438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N8Q0	-
ENSBTAT00000071841.2	PSTPIP1-202	1470	407aa	ENSBTAP00000065401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MA62	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000094736.1	PSTPIP1-204	686	197aa	ENSBTAP00000103502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 1,615 bps, Translation length: 417 residues

Version

ENSBTAT00000066698.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000066698.2 PSTPIP1-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSBTAT00000066698.2 PSTPIP1-205

Summary

About Us

Get help

Our sister sites

Follow us