Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: ENSBTAT00000080974.2 KDM4B-202

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Description

lysine demethylase 4B [Source:VGNC Symbol;Acc:VGNC:30528]

Location

Primary_assembly 7: 19,096,178-19,185,124 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 45 domains and features and is associated with 6685 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000015487.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000020586.6	KDM4B-201	4655	1116aa	ENSBTAP00000020586.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BA41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000080974.2	KDM4B-202	4553	1082aa	ENSBTAP00000063904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3A5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000095366.1	KDM4B-203	4419	1019aa	ENSBTAP00000085846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Protein summary

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Protein domains for ENSBTAP00000063904.1

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