Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSBTAT00000056481.3 RPRD1A-202

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Description

regulation of nuclear pre-mRNA domain containing 1A [Source:VGNC Symbol;Acc:VGNC:34126]

Location

Primary_assembly 24: 21,051,786-21,088,257 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features and is associated with 1530 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000005497.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000113502.1	RPRD1A-201	1950	315aa	ENSBTAP00000100555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000056481.3	RPRD1A-202	2214	270aa	ENSBTAP00000048688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P5J9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000112388.1	RPRD1A-203	1832	302aa	ENSBTAP00000088703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000007226.6	RPRD1A-205	1006	266aa	ENSBTAP00000007226.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P5J9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000070914.2	RPRD1A-204	918	290aa	ENSBTAP00000060231.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LT62	-

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Protein summary

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Protein domains for ENSBTAP00000048688.1

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