Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSBTAT00000039811.6 COL13A1-204

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Description

collagen type XIII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:27555]

Location

Primary_assembly 28: 26,095,666-26,248,050 forward strand.

About this transcript

This transcript has 36 exons, is annotated with 24 domains and features and is associated with 10347 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000011741.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000095036.1	COL13A1-201	2936	727aa	ENSBTAP00000083765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000131398.1	COL13A1-202	2903	716aa	ENSBTAP00000096180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000094247.1	COL13A1-203	2837	694aa	ENSBTAP00000102830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000039811.6	COL13A1-204	2810	685aa	ENSBTAP00000039599.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RND5	-
ENSBTAT00000120264.1	COL13A1-205	2804	683aa	ENSBTAP00000087033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000108838.1	COL13A1-206	2756	667aa	ENSBTAP00000075598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000118558.1	COL13A1-207	2726	657aa	ENSBTAP00000093194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000103655.1	COL13A1-208	2687	644aa	ENSBTAP00000093172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000109395.1	COL13A1-209	2582	609aa	ENSBTAP00000086904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Protein summary

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Protein domains for ENSBTAP00000039599.6

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