Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSBTAT00000027762.5 CHD1L-205

.

Description

chromodomain helicase DNA binding protein 1 like [Source:VGNC Symbol;Acc:VGNC:27277]

Location

Primary_assembly 3: 22,381,862-22,446,397 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 31 domains and features and is associated with 3710 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000020831.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027762.5	CHD1L-205	3002	897aa	ENSBTAP00000027762.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000130155.1	CHD1L-201	3111	846aa	ENSBTAP00000097254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000105992.1	CHD1L-206	2903	864aa	ENSBTAP00000092876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000125873.1	CHD1L-207	2891	860aa	ENSBTAP00000096352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000094664.1	CHD1L-208	2687	792aa	ENSBTAP00000083485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000128116.1	CHD1L-202	2528	745aa	ENSBTAP00000077476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000090797.1	CHD1L-203	2372	693aa	ENSBTAP00000091975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101002.1	CHD1L-204	1841	516aa	ENSBTAP00000081588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Protein summary

.

Protein domains for ENSBTAP00000027762.5

.