Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSBTAT00000006003.6 PRRX1-203

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Description

paired related homeobox 1 [Source:VGNC Symbol;Acc:VGNC:33412]

Location

Primary_assembly 16: 38,201,016-38,275,234 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features and is associated with 2593 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000004570.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006003.6	PRRX1-203	983	245aa	ENSBTAP00000006003.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VE85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132562.1	PRRX1-201	1847	200aa	ENSBTAP00000080760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000078802.2	PRRX1-202	914	217aa	ENSBTAP00000059209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMJ0	-

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Protein summary

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Protein domains for ENSBTAP00000006003.5

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