Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OPHN1 ENSBTAG00000055120

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Description

oligophrenin 1 [Source:VGNC Symbol;Acc:VGNC:106854]

Location

Primary_assembly X: 81,979,758-82,704,714 forward strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 7 transcripts (splice variants), 200 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000107091.1	OPHN1-207	3059	829aa	ENSBTAP00000084201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000082643.2	OPHN1-204	2619	803aa	ENSBTAP00000066130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N6J8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000092376.1	OPHN1-206	2568	786aa	ENSBTAP00000101876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000108833.1	OPHN1-205	2514	768aa	ENSBTAP00000076701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000076739.2	OPHN1-202	2454	748aa	ENSBTAP00000057699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LLP5	-
ENSBTAT00000067249.2	OPHN1-203	2295	695aa	ENSBTAP00000070094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MG10	-
ENSBTAT00000100890.1	OPHN1-201	478	64aa	ENSBTAP00000085976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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