Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA9 ENSBTAG00000053595

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Description

homeobox A9 [Source:VGNC Symbol;Acc:VGNC:107226]

Location

Primary_assembly 4: 68,876,700-68,880,437 forward strand.

ARS-UCD1.3:CM008171.2

About this gene

This gene has 2 transcripts (splice variants), 237 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132203.1	HOXA9-201	3317	379aa	ENSBTAP00000101433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7Z086	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000084482.2	HOXA9-202	1948	195aa	ENSBTAP00000073548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MNP3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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