Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP1 ENSBTAG00000050239

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Description

caspase 1 [Source:VGNC Symbol;Acc:VGNC:106669]

Location

Primary_assembly 15: 3,213,132-3,247,708 forward strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 451 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000072083.2	CASP1-202	1293	403aa	ENSBTAP00000067605.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MFA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000077273.2	CASP1-201	1290	391aa	ENSBTAP00000059893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LS96	-
ENSBTAT00000121719.1	CASP1-203	873	263aa	ENSBTAP00000090954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000092701.1	CASP1-204	348	88aa	ENSBTAP00000096497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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