Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CALM1 ENSBTAG00000025644

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Description

calmodulin 1 [Source:NCBI gene (formerly Entrezgene);Acc:617095]

Location

Primary_assembly 10: 102,005,670-102,013,425 forward strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 4 transcripts (splice variants), 149 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134382.1	CALM1-204	1425	186aa	ENSBTAP00000080084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000083507.2	CALM1-201	1550	150aa	ENSBTAP00000058610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P62157	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000036194.6	CALM1-202	1473	149aa	ENSBTAP00000036057.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ55	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000075756.2	CALM1-203	1317	150aa	ENSBTAP00000069277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6C6	-

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Summary

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