Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PPFIA1 ENSBTAG00000022188

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Description

PTPRF interacting protein alpha 1 [Source:VGNC Symbol;Acc:VGNC:56275]

Location

Primary_assembly 29: 47,422,542-47,497,321 forward strand.

ARS-UCD1.3:CM008196.2

About this gene

This gene has 4 transcripts (splice variants), 219 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000031388.6	PPFIA1-201	4369	1227aa	ENSBTAP00000031343.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MD37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000029943.6	PPFIA1-202	4357	1223aa	ENSBTAP00000029933.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BBK8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000073078.2	PPFIA1-203	4042	1118aa	ENSBTAP00000071440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBH3	-
ENSBTAT00000070096.2	PPFIA1-204	4027	1113aa	ENSBTAP00000062676.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N164	-

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Summary

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