Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UPF1 ENSBTAG00000020922

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Description

UPF1 RNA helicase and ATPase [Source:VGNC Symbol;Acc:VGNC:36680]

Location

Primary_assembly 7: 4,337,611-4,368,677 reverse strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 2 transcripts (splice variants), 216 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000088279.1	UPF1-201	3652	1149aa	ENSBTAP00000089925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000027868.7	UPF1-202	3586	1127aa	ENSBTAP00000027868.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BEK9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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