Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SLC14A1 ENSBTAG00000019870

.

Description

solute carrier family 14 member 1 [Source:VGNC Symbol;Acc:VGNC:53653]

Location

Primary_assembly 24: 45,439,649-45,464,253 forward strand.

ARS-UCD1.3:CM008191.2

About this gene

This gene has 4 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071419.2	SLC14A1-201	3505	439aa	ENSBTAP00000071511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5QF96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000026475.5	SLC14A1-204	3330	393aa	ENSBTAP00000026475.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5QF96	-
ENSBTAT00000046861.2	SLC14A1-203	2402	384aa	ENSBTAP00000044109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5QF96	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000071308.2	SLC14A1-202	1251	377aa	ENSBTAP00000069518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJZ6	-

.

Summary

.

.