Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
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External references
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ID History
- Gene history

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Gene: APLF ENSBTAG00000018401

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Description

aprataxin and PNKP like factor [Source:VGNC Symbol;Acc:VGNC:59203]

Location

Primary_assembly 11: 66,865,005-66,958,571 forward strand.

ARS-UCD1.3:CM008178.2

About this gene

This gene has 5 transcripts (splice variants) and 179 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098254.1	APLF-202	1761	510aa	ENSBTAP00000075149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000063133.3	APLF-203	2914	509aa	ENSBTAP00000055056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MZQ3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000114855.1	APLF-201	2851	488aa	ENSBTAP00000096315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000044615.3	APLF-204	2805	485aa	ENSBTAP00000042099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JNH9	-
ENSBTAT00000117368.1	APLF-205	2695	493aa	ENSBTAP00000097226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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