Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG13 ENSBTAG00000017325

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Description

autophagy related 13 [Source:VGNC Symbol;Acc:VGNC:26251]

Location

Primary_assembly 15: 76,578,279-76,620,854 forward strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 6 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000130653.1	ATG13-202	4059	550aa	ENSBTAP00000098462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000119658.1	ATG13-203	4005	532aa	ENSBTAP00000093795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000023036.7	ATG13-204	3894	495aa	ENSBTAP00000023036.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08DY8	-
ENSBTAT00000101923.1	ATG13-205	3786	459aa	ENSBTAP00000083732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000129299.1	ATG13-206	2207	496aa	ENSBTAP00000101769.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000081782.2	ATG13-201	1971	542aa	ENSBTAP00000063869.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N386	-

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Summary

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