Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: VAPA ENSBTAG00000017279

.

Description

VAMP associated protein A [Source:VGNC Symbol;Acc:VGNC:36763]

Location

Primary_assembly 24: 41,892,998-41,928,962 forward strand.

ARS-UCD1.3:CM008191.2

About this gene

This gene has 7 transcripts (splice variants), 249 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000076571.2	VAPA-203	930	309aa	ENSBTAP00000064278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000107254.1	VAPA-201	1681	294aa	ENSBTAP00000081978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000022970.5	VAPA-202	1546	249aa	ENSBTAP00000022970.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCY1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000096786.1	VAPA-204	1519	233aa	ENSBTAP00000078661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000086880.2	VAPA-206	924	307aa	ENSBTAP00000066102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6X6	-
ENSBTAT00000082366.1	VAPA-205	798	265aa	ENSBTAP00000062752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZJ2	-
ENSBTAT00000133660.1	VAPA-207	771	256aa	ENSBTAP00000097394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.