Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLCC1 ENSBTAG00000017129

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Description

chloride channel CLIC like 1 [Source:VGNC Symbol;Acc:VGNC:27394]

Location

Primary_assembly 3: 34,397,845-34,430,982 forward strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 6 transcripts (splice variants) and 119 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000022767.5	CLCC1-203	2127	542aa	ENSBTAP00000022767.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LZF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000115534.1	CLCC1-201	2034	508aa	ENSBTAP00000099660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000109688.1	CLCC1-204	1905	468aa	ENSBTAP00000078423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000110533.1	CLCC1-205	1764	421aa	ENSBTAP00000095006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000093443.1	CLCC1-206	1572	357aa	ENSBTAP00000081584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000126604.1	CLCC1-202	1553	466aa	ENSBTAP00000084353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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