Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB2 ENSBTAG00000016334

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Description

SATB homeobox 2 [Source:VGNC Symbol;Acc:VGNC:34299]

Location

Primary_assembly 2: 87,842,625-88,060,799 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 9 transcripts (splice variants), 262 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098138.1	SATB2-202	3840	879aa	ENSBTAP00000090441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000077594.2	SATB2-203	3655	775aa	ENSBTAP00000068350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N426	-
ENSBTAT00000071510.2	SATB2-204	3545	733aa	ENSBTAP00000065660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N426	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000091460.1	SATB2-205	3191	615aa	ENSBTAP00000088774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000125166.1	SATB2-201	3026	674aa	ENSBTAP00000092524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000021729.6	SATB2-206	2276	667aa	ENSBTAP00000021729.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N426	-
ENSBTAT00000088587.1	SATB2-209	761	144aa	ENSBTAP00000083019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000133675.1	SATB2-208	723	129aa	ENSBTAP00000089051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000090722.1	SATB2-207	699	119aa	ENSBTAP00000095316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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