Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Orthologues
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Gene: GOPC ENSBTAG00000016046

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Description

golgi associated PDZ and coiled-coil motif containing [Source:VGNC Symbol;Acc:VGNC:53793]

Location

Primary_assembly 9: 33,189,369-33,228,661 forward strand.

ARS-UCD1.3:CM008176.2

About this gene

This gene has 4 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096647.1	GOPC-204	2674	475aa	ENSBTAP00000084901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000021350.6	GOPC-201	1743	463aa	ENSBTAP00000021350.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BAX1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000070505.2	GOPC-202	1623	423aa	ENSBTAP00000071797.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MCF2	-
ENSBTAT00000103511.1	GOPC-203	1578	408aa	ENSBTAP00000079466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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