Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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External references
Supporting evidence
ID History
- Gene history

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Gene: NUP42 ENSBTAG00000016014

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Description

nucleoporin 42 [Source:VGNC Symbol;Acc:VGNC:32368]

Gene Synonyms

NUPL2

Location

Primary_assembly 4: 31,829,701-31,843,769 forward strand.

ARS-UCD1.3:CM008171.2

About this gene

This gene has 2 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000021317.5	NUP42-201	1365	420aa	ENSBTAP00000021317.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2YDG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000126523.1	NUP42-202	1282	405aa	ENSBTAP00000099215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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