Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RBP7 ENSBTAG00000015574

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Description

retinol binding protein 7 [Source:VGNC Symbol;Acc:VGNC:33817]

Location

Primary_assembly 16: 43,517,997-43,564,495 reverse strand.

ARS-UCD1.3:CM008183.2

About this gene

This gene has 6 transcripts (splice variants), 183 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000096324.1	RBP7-204	1153	251aa	ENSBTAP00000079411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000104082.1	RBP7-206	966	175aa	ENSBTAP00000084795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000102685.1	RBP7-203	898	126aa	ENSBTAP00000089753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020700.6	RBP7-205	770	123aa	ENSBTAP00000020700.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MIF5	-
ENSBTAT00000104196.1	RBP7-202	695	128aa	ENSBTAP00000091740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000115707.1	RBP7-201	695	178aa	ENSBTAP00000095859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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