Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PICK1 ENSBTAG00000015268

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Description

protein interacting with PRKCA 1 [Source:VGNC Symbol;Acc:VGNC:32861]

Location

Primary_assembly 5: 109,834,512-109,851,246 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000085061.2	PICK1-205	1409	430aa	ENSBTAP00000066342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MC64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000020311.6	PICK1-201	1737	412aa	ENSBTAP00000020311.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6J2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000042708.3	PICK1-202	1418	399aa	ENSBTAP00000040340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N6J2	-
ENSBTAT00000134416.1	PICK1-203	1262	354aa	ENSBTAP00000091088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000086971.2	PICK1-204	1065	354aa	ENSBTAP00000063461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LST1	-

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Summary

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