Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SDC4 ENSBTAG00000015127

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Description

syndecan 4 [Source:VGNC Symbol;Acc:VGNC:34381]

Location

Primary_assembly 13: 73,670,726-73,691,327 reverse strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000020125.5	SDC4-202	1704	199aa	ENSBTAP00000020125.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000125889.1	SDC4-201	1557	118aa	ENSBTAP00000093467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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