Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HERC2 ENSBTAG00000013916

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Description

HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:VGNC Symbol;Acc:VGNC:59172]

Location

Primary_assembly 2: 719,767-952,932 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 4 transcripts (splice variants), 199 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000018496.6	HERC2-202	15356	4837aa	ENSBTAP00000018496.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B782	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000130907.1	HERC2-201	15545	4836aa	ENSBTAP00000084704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000128218.1	HERC2-203	636	91aa	ENSBTAP00000080922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000093551.1	HERC2-204	632	80aa	ENSBTAP00000091632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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