Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
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Ontologies
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ID History
- Gene history

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Gene: PSPH ENSBTAG00000013081

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Description

phosphoserine phosphatase [Source:VGNC Symbol;Acc:VGNC:33483]

Location

Primary_assembly 25: 27,697,070-27,719,435 reverse strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000132811.1	PSPH-202	1381	258aa	ENSBTAP00000095573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000113791.1	PSPH-201	1572	230aa	ENSBTAP00000076873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000017392.5	PSPH-203	1512	255aa	ENSBTAP00000017392.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KHU0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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