Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: NUP88 ENSBTAG00000011507

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Description

nucleoporin 88 [Source:VGNC Symbol;Acc:VGNC:32365]

Location

Primary_assembly 19: 26,128,009-26,149,670 forward strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 4 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000001625.6	NUP88-201	2497	754aa	ENSBTAP00000001625.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZ56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000128689.1	NUP88-202	2374	713aa	ENSBTAP00000089847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000133616.1	NUP88-203	2338	701aa	ENSBTAP00000091991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000132452.1	NUP88-204	2176	647aa	ENSBTAP00000095433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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