Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC39A1 ENSBTAG00000011284

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Description

solute carrier family 39 member 1 [Source:VGNC Symbol;Acc:VGNC:34857]

Location

Primary_assembly 3: 16,473,115-16,477,147 forward strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099642.1	SLC39A1-203	2239	347aa	ENSBTAP00000095189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000034015.5	SLC39A1-201	2052	324aa	ENSBTAP00000033917.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SYU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000093677.1	SLC39A1-202	1850	172aa	ENSBTAP00000086213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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