Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG4D ENSBTAG00000010727

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Description

autophagy related 4D cysteine peptidase [Source:VGNC Symbol;Acc:VGNC:26260]

Location

Primary_assembly 7: 15,053,168-15,061,657 forward strand.

ARS-UCD1.3:CM008174.2

About this gene

This gene has 2 transcripts (splice variants), 257 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000014200.6	ATG4D-201	1962	472aa	ENSBTAP00000014200.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N5L1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000053355.3	ATG4D-202	1607	359aa	ENSBTAP00000052669.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQI5	-

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Summary

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