Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Gene: FAN1 ENSBTAG00000009855

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Description

FANCD2 and FANCI associated nuclease 1 [Source:VGNC Symbol;Acc:VGNC:28851]

Location

Primary_assembly 21: 27,412,439-27,484,809 forward strand.

ARS-UCD1.3:CM008188.2

About this gene

This gene has 4 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081637.2	FAN1-204	3598	1057aa	ENSBTAP00000059745.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000086891.2	FAN1-202	4546	1039aa	ENSBTAP00000062609.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZ70	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000035195.5	FAN1-201	3905	996aa	ENSBTAP00000035073.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZ88	-
ENSBTAT00000080475.2	FAN1-203	3701	992aa	ENSBTAP00000068227.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MZ88	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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