Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
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Pathway
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External references
Supporting evidence
ID History
- Gene history

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Gene: LSM3 ENSBTAG00000007363

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Description

LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:31055]

Location

Primary_assembly 22: 58,028,305-58,040,013 reverse strand.

ARS-UCD1.3:CM008189.2

About this gene

This gene has 4 transcripts (splice variants) and 218 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000097824.1	LSM3-202	839	136aa	ENSBTAP00000082309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000124068.1	LSM3-203	729	129aa	ENSBTAP00000094888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000009684.5	LSM3-204	637	102aa	ENSBTAP00000009684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIA6 Q32PE9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000093094.1	LSM3-201	327	94aa	ENSBTAP00000101469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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