Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCM1 ENSBTAG00000007236

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Description

pericentriolar material 1 [Source:VGNC Symbol;Acc:VGNC:32634]

Location

Primary_assembly 27: 19,262,169-19,352,077 reverse strand.

ARS-UCD1.3:CM008194.2

About this gene

This gene has 4 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070205.2	PCM1-203	7962	2158aa	ENSBTAP00000061767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LX22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000077174.2	PCM1-204	7835	2115aa	ENSBTAP00000067782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M2V7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000061016.4	PCM1-202	7629	2056aa	ENSBTAP00000053719.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BC93	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000075465.2	PCM1-201	7482	2093aa	ENSBTAP00000056924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LFH6	-

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Summary

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