Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EPB41 ENSBTAG00000006667

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Description

erythrocyte membrane protein band 4.1 [Source:VGNC Symbol;Acc:VGNC:28519]

Location

Primary_assembly 2: 124,431,682-124,605,882 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 10 transcripts (splice variants), 283 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082468.2	EPB41-201	3711	977aa	ENSBTAP00000060360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000008765.7	EPB41-205	3648	956aa	ENSBTAP00000008765.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MCU4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000008760.7	EPB41-202	3401	860aa	ENSBTAP00000008760.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N179	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000074034.2	EPB41-203	3332	837aa	ENSBTAP00000057035.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTG0	-
ENSBTAT00000071460.2	EPB41-204	3162	763aa	ENSBTAP00000059380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQM4	-
ENSBTAT00000074493.2	EPB41-206	3093	771aa	ENSBTAP00000057975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LH48	-
ENSBTAT00000108472.1	EPB41-209	2715	824aa	ENSBTAP00000101473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000117540.1	EPB41-208	2652	803aa	ENSBTAP00000075261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000096133.1	EPB41-210	2592	783aa	ENSBTAP00000080297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000086194.2	EPB41-207	2235	744aa	ENSBTAP00000060687.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LYH7	-

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Summary

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